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3DNA Array Detection
Protocols

Quick Plant RNA Isolation Protocol
 
1.   Combine 5 ml extraction buffer and 5 ml phenol (DEPC H2O equilibrated) to a sterile 50 ml tube. Heat to 80° for at least 10 minutes.
2.   Add well ground tissue (1-2 grams) to hot phenol/extraction buffer.
3.   Vortex 30 sec. Add 5 ml chloroform/isoamyl alcohol (24:1) and vortex 30 sec. .
4.   Centrifuge in a superspeed centrifuge for 25 min, 9000 rpm, at 4°.
5.   Remove aqueous phase to a clean sterile 50 ml tube. Add an equal volume of 4M LiCl.
6.   Freeze at -80° for at least 1 hour.
7.   Centrifuge 20 min, 9000 rpm, 4°.
8.   Pour off supernatant and wash pellet with 2-5mls 70% EtOH. Spin at 4° for 10 min.
9.   Pour off EtOH and air dry pellet.
10.   Resuspend pellet in 50 - 200ul ddH2O
     
    RNA Extraction Buffer

100mM LiCl
100 mM Tris pH 8.0
10mM EDTA
1% SDS

From the laboratory of James J. Giovannoni USDA Plant, Soil, and Nutrition Laboratory Boyce Thompson Institute for Plant Research Tower Road, Ithaca, NY
 
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